Dongyu Xue

8 papers · 2023–2025 · 3 conferences · across top CS/AI conferences

Achievements

🌍 Conference Polyglot (3) 🌉 Interdisciplinary Bridge 🧭 Keyword Pioneer 🐝 Cross-Pollinator (10) ⚡ Prolific Year (5)

Conferences

ICML (5) ICLR (2) NIPS (1)

Top co-authors

Quanquan Gu (8) Zaixiang Zheng (8) Fei Ye (5) Xinyou Wang (4) Xiangxin Zhou (4) Shujian Huang (3) Ruizhe Chen (2) Yi Zhou (1) Xiangxiang Zeng (1) Lihao Wang (1)

Keywords

protein design (1) diffusion model (1) molecular design (1) protein language model (1) antibody design (1) protein structure (1) sequence recovery (1) structural adapter (1) de novo protein (1) energy-based optimization (1)

Papers

An All-Atom Generative Model for Designing Protein Complexes ICML 2025

Elucidating the Design Space of Multimodal Protein Language Models ICML 2025

ProteinBench: A Holistic Evaluation of Protein Foundation Models ICLR 2025

Designing Cyclic Peptides via Harmonic SDE with Atom-Bond Modeling ICML 2025

DPLM-2: A Multimodal Diffusion Protein Language Model ICLR 2025

Diffusion Language Models Are Versatile Protein Learners ICML 2024

Antigen-Specific Antibody Design via Direct Energy-based Preference Optimization NIPS 2024

Structure-informed Language Models Are Protein Designers ICML 2023