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Bioinformatics

239 directly classified papers

Papers per year

Papers

Automatic Term Name Generation for Gene Ontology: Task and Dataset EMNLP 2020
Learning Informative Representations of Biomedical Relations with Latent Variable Models EMNLP 2020
Learning Nanoscale Motion Patterns of Vesicles in Living Cells CVPR 2020
Improving Molecular Design by Stochastic Iterative Target Augmentation ICML 2020
Learning Mutational Semantics NIPS 2020
ERLKG: Entity Representation Learning and Knowledge Graph based association analysis of COVID-19 through mining of unstructured biomedical corpora EMNLP 2020
GGPONC: A Corpus of German Medical Text with Rich Metadata Based on Clinical Practice Guidelines EMNLP 2020
BENNERD: A Neural Named Entity Linking System for COVID-19 EMNLP 2020
RDoC Task at BioNLP-OST 2019 EMNLP 2019
Integration of Deep Learning and Traditional Machine Learning for Knowledge Extraction from Biomedical Literature EMNLP 2019
BOUN-ISIK Participation: An Unsupervised Approach for the Named Entity Normalization and Relation Extraction of Bacteria Biotopes EMNLP 2019
Linguistically Informed Relation Extraction and Neural Architectures for Nested Named Entity Recognition in BioNLP-OST 2019 EMNLP 2019
REflex: Flexible Framework for Relation Extraction in Multiple Domains ACL 2019
Clinical Case Reports for NLP ACL 2019
Embedding Biomedical Ontologies by Jointly Encoding Network Structure and Textual Node Descriptors ACL 2019
Evaluation of Semantic Change of Harm-Related Concepts in Psychology ACL 2019
Biologically-Constrained Graphs for Global Connectomics Reconstruction CVPR 2019
A coupled autoencoder approach for multi-modal analysis of cell types NIPS 2019
End-to-End Learning on 3D Protein Structure for Interface Prediction NIPS 2019
Deep imitation learning for molecular inverse problems NIPS 2019
A Fast Machine Learning Workflow for Rapid Phenotype Prediction from Whole Shotgun Metagenomes AAAI 2019
A Powerful Global Test Statistic for Functional Statistical Inference AAAI 2019
A2-Net: Molecular Structure Estimation from Cryo-EM Density Volumes AAAI 2019
Molecular Property Prediction: A Multilevel Quantum Interactions Modeling Perspective AAAI 2019
Learning Latent Parameters without Human Response Patterns: Item Response Theory with Artificial Crowds EMNLP 2019