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Bioinformatics

638 directly classified papers

Papers per year

Papers

Extrapolative Controlled Sequence Generation via Iterative Refinement ICML 2023
Bidirectional Learning for Offline Model-based Biological Sequence Design ICML 2023
Generalized Cell Type Annotation and Discovery for Single-Cell RNA-Seq Data AAAI 2023
SE(3) diffusion model with application to protein backbone generation ICML 2023
RepMode: Learning to Re-Parameterize Diverse Experts for Subcellular Structure Prediction CVPR 2023
Extracting Drug-Drug and Protein-Protein Interactions from Text using a Continuous Update of Tree-Transformers ACL 2023
Weight Predictor Network with Feature Selection for Small Sample Tabular Biomedical Data AAAI 2023
MolHF: A Hierarchical Normalizing Flow for Molecular Graph Generation IJCAI 2023
BIOptimus: Pre-training an Optimal Biomedical Language Model with Curriculum Learning for Named Entity Recognition ACL 2023
FFF: Fragment-Guided Flexible Fitting for Building Complete Protein Structures CVPR 2023
Reducing Knowledge Noise for Improved Semantic Analysis in Biomedical Natural Language Processing Applications ACL 2023
Multi-source Learning via Completion of Block-wise Overlapping Noisy Matrices JMLR 2023
Kernel Sufficient Dimension Reduction and Variable Selection for Compositional Data via Amalgamation ICML 2023
VBD-NLP at BioLaySumm Task 1: Explicit and Implicit Key Information Selection for Lay Summarization on Biomedical Long Documents ACL 2023
NCUEE-NLP at BioLaySumm Task 2: Readability-Controlled Summarization of Biomedical Articles Using the PRIMERA Models ACL 2023
Disease Network Constructor: a Pathway Extraction and Visualization ACL 2023
Learning to Describe for Predicting Zero-shot Drug-Drug Interactions EMNLP 2023
Exploring the Interaction between Local and Global Latent Configurations for Clustering Single-Cell RNA-Seq: A Unified Perspective AAAI 2023
DISTANT: Distantly Supervised Entity Span Detection and Classification ACL 2023
Overview of the BioLaySumm 2023 Shared Task on Lay Summarization of Biomedical Research Articles ACL 2023
Molecular Representation Learning via Heterogeneous Motif Graph Neural Networks ICML 2022
Bayesian Multinomial Logistic Normal Models through Marginally Latent Matrix-T Processes JMLR 2022
ZINB-Based Graph Embedding Autoencoder for Single-Cell RNA-Seq Interpretations AAAI 2022
GeomGCL: Geometric Graph Contrastive Learning for Molecular Property Prediction AAAI 2022
Contact-Distil: Boosting Low Homologous Protein Contact Map Prediction by Self-Supervised Distillation AAAI 2022