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Bioinformatics

638 directly classified papers

Papers per year

Papers

HEST-1k: A Dataset For Spatial Transcriptomics and Histology Image Analysis NIPS 2024
Empowering Active Learning for 3D Molecular Graphs with Geometric Graph Isomorphism NIPS 2024
End-to-End Relation Extraction of Pharmacokinetic Estimates from the Scientific Literature ACL 2024
MSA Generation with Seqs2Seqs Pretraining: Advancing Protein Structure Predictions NIPS 2024
A probability contrastive learning framework for 3D molecular representation learning NIPS 2024
DART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA NIPS 2024
ProtT3: Protein-to-Text Generation for Text-based Protein Understanding ACL 2024
ZeroDDI: A Zero-Shot Drug-Drug Interaction Event Prediction Method with Semantic Enhanced Learning and Dual-modal Uniform Alignment IJCAI 2024
Atom-Level Optical Chemical Structure Recognition with Limited Supervision CVPR 2024
Physical Consistency Bridges Heterogeneous Data in Molecular Multi-Task Learning NIPS 2024
MolTailor: Tailoring Chemical Molecular Representation to Specific Tasks via Text Prompts AAAI 2024
Distribution-Independent Cell Type Identification for Single-Cell RNA-seq Data IJCAI 2024
LUWA Dataset: Learning Lithic Use-Wear Analysis on Microscopic Images CVPR 2024
DePLM: Denoising Protein Language Models for Property Optimization NIPS 2024
GmGM: a fast multi-axis Gaussian graphical model AISTATS 2024
Heterogeneous Causal Metapath Graph Neural Network for Gene-Microbe-Disease Association Prediction IJCAI 2024
InstructProtein: Aligning Human and Protein Language via Knowledge Instruction ACL 2024
ProtGO: Function-Guided Protein Modeling for Unified Representation Learning NIPS 2024
MapLE: Matching Molecular Analogues Promptly with Low Computational Resources by Multi-Metrics Evaluation (Student Abstract) AAAI 2024
Designing Cell-Type-Specific Promoter Sequences Using Conservative Model-Based Optimization NIPS 2024
Levenshtein Distance Embedding with Poisson Regression for DNA Storage AAAI 2024
RGFN: Synthesizable Molecular Generation Using GFlowNets NIPS 2024
Shape analysis for time series NIPS 2024
Foundation Model for Biomedical Graphs: Integrating Knowledge Graphs and Protein Structures to Large Language Models ACL 2024
Antigen-Specific Antibody Design via Direct Energy-based Preference Optimization NIPS 2024